RACS_id Recurrent.Gain.Loss X.log10.pValue. chr start stop KnownDrivers nGenes FragileSiteName FragileSiteCommon FragileSiteRare toplvl GenesInSegment Genetic_Coordinates KnownDrivers_Extended locus cnaBRCA1 loss 4.27089 19 284018 2429804 STK11 86 FRA19B 0 1 1 ABCA7,ABHD17A,ADAMTSL5,ADAT3,AMH,AP3D1,APC2,ARID3A,ATP5D,ATP8B3,AZU1,BSG,BTBD2,C19orf24,C19orf25,C19orf26,C19orf35,C2CD4C,CDC34,CFD,CIRBP,CNN2,CSNK1G2,DAZAP1,DOT1L,EFNA2,ELANE,FGF22,FSTL3,GAMT,GPX4,GRIN3B,GZMM,HCN2,HMHA1,IZUMO4,JSRP1,KISS1R,KLF16,LINGO3,LMNB2,LPPR3,LSM7,MADCAM1,MBD3,MED16,MEX3D,MIDN,MIER2,MISP,MKNK2,MOB3A,MUM1,NDUFS7,OAZ1,ODF3L2,ONECUT3,PALM,PCSK4,PLEKHJ1,PLK5,POLR2E,POLRMT,PPAP2C,PRSS57,PRTN3,PTBP1,R3HDM4,REEP6,REXO1,RNF126,RPS15,SBNO2,SCAMP4,SF3A2,SHC2,STK11,TCF3,THEG,TIMM13,TMEM259,TMPRSS9,TPGS1,UQCR11,UQCR11,WDR18 chr19:284018-2429804 STK11 19p13.3 cnaBRCA2 loss 6.43658 19 11166176 11173230 SMARCA4 1 FRA19B 0 1 1 SMARCA4 chr19:11166176-11173230 SMARCA4 19p13.2 cnaBRCA3 loss 24.057624 19 21714129 21721990 1 0 0 1 ZNF429 chr19:21714129-21721990 19p12 cnaBRCA4 loss 15.436249 19 21934137 21937046 1 0 0 1 ZNF100 chr19:21934137-21937046 19p12 cnaBRCA5 gain 1.547748 10 415240 18884523 GATA3 89 0 0 0 ACBD7,ADARB2,AKR1C1,AKR1C2,AKR1C3,AKR1C4,AKR1CL1,AKR1E2,ANKRD16,ASB13,ATP5C1,BEND7,C10orf111,C1QL3,CACNB2,CALML3,CALML5,CAMK1D,CCDC3,CDC123,CDNF,CELF2,CUBN,DCLRE1C,DHTKD1,DIP2C,ECHDC3,FAM107B,FAM171A1,FAM188A,FAM208B,FBXO18,FRMD4A,GATA3,GDI2,GTPBP4,HSPA14,IDI1,IDI2,IL15RA,IL2RA,ITGA8,ITIH2,ITIH5,KIN,KLF6,LARP4B,MCM10,MEIG1,MRC1,MRC1L1,NET1,NMT2,NSUN6,NUDT5,OLAH,OPTN,PFKFB3,PFKP,PHYH,PITRM1,PRKCQ,PROSER2,PRPF18,PRR26,PTER,PTPLA,RBM17,RP11-295P9.3,RPP38,RSU1,SEC61A2,SEPHS1,SFMBT2,SLC39A12,ST8SIA6,STAM,SUV39H2,TAF3,TMEM236,TMEM236,TRDMT1,TUBAL3,UCMA,UCN3,UPF2,USP6NL,VIM,WDR37 chr10:415240-18884523 GATA3,KLF6,LARP4B,VIM 10p15.3 cnaBRCA6 loss 2.675406 10 50730543 50734400 3 FRA10G 1 0 1 ERCC6,ERCC6-PGBD3,PGBD3 chr10:50730543-50734400 10q11.23 cnaBRCA7 loss 1.392739 10 89263180 91589165 FAS,PTEN 25 0 0 1 ACTA2,ANKRD22,ATAD1,CH25H,FAS,IFIT1,IFIT1B,IFIT2,IFIT3,IFIT5,KIF20B,KLLN,LIPA,LIPF,LIPJ,LIPK,LIPM,LIPN,MINPP1,PANK1,PAPSS2,PTEN,RNLS,SLC16A12,STAMBPL1 chr10:89263180-91589165 FAS,PTEN 10q23.2 cnaBRCA8 gain 9.827409 12 889902 7799359 86 0 0 0 ACRBP,ACSM4,ADIPOR2,AKAP3,ANO2,ATN1,C12orf4,C12orf5,C12orf57,C1R,C1RL,C1S,CACNA1C,CACNA2D4,CCND2,CD163,CD163L1,CD27,CD4,CD9,CDCA3,CHD4,CLSTN3,COPS7A,DCP1B,DYRK4,EFCAB4B,EMG1,ENO2,ERC1,FBXL14,FGF23,FGF6,FKBP4,FOXM1,GALNT8,GAPDH,GNB3,GPR162,IFFO1,ING4,ITFG2,KCNA1,KCNA5,KCNA6,LAG3,LPAR5,LPCAT3,LRRC23,LRTM2,LTBR,MLF2,MRPL51,NCAPD2,NDUFA9,NOP2,NRIP2,NTF3,PARP11,PEX5,PHB2,PIANP,PLEKHG6,PRMT8,PTMS,PTPN6,RAD51AP1,RAD52,RBP5,RHNO1,RP11-234B24.6,RP11-500M8.7,SCNN1A,SPSB2,TAPBPL,TEAD4,TNFRSF1A,TPI1,TSPAN9,TULP3,USP5,VAMP1,VWF,WNK1,WNT5B,ZNF384 chr12:889902-7799359 CHD4,WNK1 12p13.33 cnaBRCA9 gain 6.082825 12 22720506 33521107 KRAS 48 0 0 0 AMN1,ARNTL2,ASUN,BCAT1,BHLHE41,BICD1,C12orf71,C12orf77,CAPRIN2,CASC1,CCDC91,DDX11,DENND5B,DNM1L,ERGIC2,ETNK1,FAM60A,FAR2,FGD4,FGFR1OP2,H3F3C,IFLTD1,IPO8,ITPR2,KIAA1551,KLHL42,KRAS,LRMP,LYRM5,MANSC4,MED21,METTL20,MRPS35,OVCH1,OVCH1-AS1,PKP2,PPFIBP1,PTHLH,RASSF8,REP15,SMCO2,SOX5,SSPN,STK38L,TM7SF3,TMTC1,TSPAN11,YARS2 chr12:22720506-33521107 KRAS 12p12.1 cnaBRCA10 gain 3.18675 12 68851033 70966840 MDM2 18 0 0 0 AC025263.3,BEST3,CCT2,CNOT2,CPM,CPSF6,FRS2,KCNMB4,LRRC10,LYZ,MDM2,MYRFL,NUP107,PTPRB,RAB3IP,RAP1B,SLC35E3,YEATS4 chr12:68851033-70966840 MDM2,NUP107 12q15 cnaBRCA11 loss 2.821509 12 126145202 126146287 1 FRA12E 1 0 1 TMEM132B chr12:126145202-126146287 12q24.32 cnaBRCA12 gain 1.957171 5 914233 5798715 TERT 18 0 0 0 ADAMTS16,C5orf38,CLPTM1L,IRX1,IRX2,IRX4,KIAA0947,LPCAT1,MRPL36,NDUFS6,NKD2,RP11-661C8.3,SLC12A7,SLC6A18,SLC6A19,SLC6A3,TERT,TRIP13 chr5:914233-5798715 TERT 5p15.33 cnaBRCA13 gain 6.277741 8 36622446 42933372 55 0 0 0 ADAM18,ADAM2,ADAM32,ADAM9,ADRB3,AGPAT6,ANK1,AP3M2,ASH2L,BAG4,BRF2,C8orf4,C8orf86,CHRNA6,CHRNB3,DDHD2,DKK4,EIF4EBP1,ERLIN2,FGFR1,FNTA,GINS4,GOLGA7,GOT1L1,GPR124,HOOK3,HTRA4,IDO1,IDO2,IKBKB,KAT6A,KCNU1,LETM2,LSM1,NKX6-3,PLAT,PLEKHA2,POLB,PPAPDC1B,PROSC,RAB11FIP1,RNF170,RP11-598P20.5,RP11-863K10.7,SFRP1,SLC20A2,SMIM19,STAR,TACC1,THAP1,TM2D2,VDAC3,WHSC1L1,ZMAT4,ZNF703 chr8:36622446-42933372 FGFR1,WHSC1L1 8p11.23 cnaBRCA14 gain 3.2183 8 115476276 118289246 RAD21 6 0 0 1 AARD,EIF3H,RAD21,SLC30A8,TRPS1,UTP23 chr8:115476276-118289246 RAD21 8q23.3 cnaBRCA15 gain 2.273617 8 128372526 128445009 1 0 0 1 POU5F1B chr8:128372526-128445009 8q24.21 cnaBRCA16 gain 2.016326 8 130291718 132592530 4 0 0 1 ADCY8,ASAP1,FAM49B,GSDMC chr8:130291718-132592530 8q24.21 cnaBRCA17 loss 1.325668 8 1821119 1828886 1 0 0 1 ARHGEF10 chr8:1821119-1828886 8p23.3 cnaBRCA18 loss 3.652771 8 3655384 4084182 1 0 0 1 CSMD1 chr8:3655384-4084182 8p23.2 cnaBRCA19 gain 1.959288 6 11128976 25892194 58 0 0 0 ACOT13,ADTRP,ALDH5A1,ATXN1,C6orf229,C6orf62,CAP2,CD83,CDKAL1,DCDC2,DEK,DTNBP1,E2F3,EDN1,FAM65B,FAM8A1,GFOD1,GMNN,GMPR,GPLD1,HDGFL1,HIST1H2AA,HIST1H2BA,HIVEP1,ID4,JARID2,KAAG1,KDM1B,KIAA0319,KIF13A,LRRC16A,MBOAT1,MCUR1,MRS2,MYLIP,NEDD9,NHLRC1,NOL7,NRSN1,NUP153,PHACTR1,PRL,RANBP9,RBM24,RNF144B,RNF182,SCGN,SIRT5,SLC17A1,SLC17A3,SLC17A4,SMIM13,SOX4,STMND1,TBC1D7,TDP2,TMEM170B,TPMT chr6:11128976-25892194 6p24.2 cnaBRCA20 loss 17.566835 6 3280887 3281570 2 0 0 1 PSMG4,SLC22A23 chr6:3280887-3281570 6p25.2 cnaBRCA21 loss 11.263206 6 24436594 24438318 1 0 0 1 GPLD1 chr6:24436594-24438318 6p22.3 cnaBRCA22 loss 3.293845 6 77594668 104651671 80 0 0 0 AKIRIN2,ANKRD6,ASCC3,BACH2,BCKDHB,C6orf163,C6orf164,C6orf165,C6ORF165,CCNC,CGA,CNR1,COQ3,CYB5R4,DOPEY1,ELOVL4,EPHA7,FAM46A,FAXC,FBXL4,FHL5,FUT9,GABRR1,GABRR2,GJA10,GJB7,GPR63,GRIK2,HMGN3,HTR1B,HTR1E,IBTK,IRAK1BP1,KIAA1009,KLHL32,LCA5,LYRM2,MANEA,MAP3K7,MCHR2,MDN1,ME1,MEI4,MMS22L,MRAP2,NDUFAF4,NT5E,ORC3,PGM3,PHIP,PM20D2,PNISR,PNRC1,POU3F2,PRDM13,PRSS35,RARS2,RIPPLY2,RNGTT,RP1-102H19.8,RP11-321N4.5,RRAGD,RWDD2A,SH3BGRL2,SIM1,SLC35A1,SMIM8,SNAP91,SNX14,SPACA1,SRSF12,SYNCRIP,TBX18,TPBG,TTK,UBE2J1,UBE3D,UFL1,USP45,ZNF292 chr6:77594668-104651671 SYNCRIP,ZNF292 6q14.1 cnaBRCA23 loss 13.231964 6 130453722 130456101 1 0 0 1 L3MBTL3 chr6:130453722-130456101 6q23.1 cnaBRCA24 loss 10.531272 6 149993089 149998391 1 0 0 1 LATS1 chr6:149993089-149998391 6q25.1 cnaBRCA25 loss 2.867964 6 155499756 170903919 71 0 0 0 ACAT2,AGPAT4,ARID1B,C6orf118,C6orf120,C6orf123,C6orf99,CCR6,CLDN20,DACT2,DLL1,DYNLT1,ERMARD,EZR,FAM120B,FGFR1OP,FNDC1,FRMD1,GPR31,GTF2H5,IGF2R,KIF25,LPA,MAP3K4,MAS1,MLLT4,MPC1,MRPL18,NOX3,PACRG,PARK2,PDCD2,PDE10A,PHF10,PLG,PNLDC1,PRR18,PSMB1,QKI,RNASET2,RP11-514O12.4,RPS6KA2,RSPH3,SERAC1,SFT2D1,SLC22A1,SLC22A2,SLC22A3,SMOC2,SNX9,SOD2,SYNJ2,SYTL3,T,TAGAP,TBP,TCP1,TCP10,TCP10L2,TCTE3,TFB1M,THBS2,TIAM2,TMEM181,TMEM242,TTLL2,TULP4,UNC93A,WDR27,WTAP,ZDHHC14 chr6:155499756-170903919 ARID1B,MAP3K4,MLLT4 6q25.2 cnaBRCA26 gain 1.335929 17 36916673 38481198 CDK12,ERBB2 41 0 0 0 ARL5C,C17orf98,CACNB1,CASC3,CDC6,CDK12,CSF3,CWC25,ERBB2,FBXL20,FBXO47,GRB7,GSDMA,GSDMB,IKZF3,LASP1,LRRC3C,MED1,MED24,MIEN1,MSL1,NEUROD2,NR1D1,ORMDL3,PGAP3,PIP4K2B,PLXDC1,PNMT,PPP1R1B,PSMB3,PSMD3,RAPGEFL1,RARA,RPL19,RPL23,STAC2,STARD3,TCAP,THRA,WIPF2,ZPBP2 chr17:36916673-38481198 CDK12,ERBB2,MED24 17q12 cnaBRCA27 gain 3.326067 17 57598146 59113326 16 0 0 1 APPBP2,BCAS3,C17orf64,CA4,CLTC,DHX40,HEATR6,PPM1D,PTRH2,RNFT1,RP11-15E18.4,RP11-178C3.1,RPS6KB1,TUBD1,USP32,VMP1 chr17:57598146-59113326 CLTC,PPM1D 17q22 cnaBRCA28 loss 6.153384 17 7217276 7233426 3 0 0 1 GPS2,NEURL4,RP11-542C16.2 chr17:7217276-7233426 GPS2 17p13.1 cnaBRCA29 loss 1.908478 17 11686046 12150209 MAP2K4 3 FRA17A 0 1 1 DNAH9,MAP2K4,ZNF18 chr17:11686046-12150209 MAP2K4 17p12 cnaBRCA30 gain 3.450076 20 16036126 26197899 63 0 0 0 ABHD12,ACSS1,APMAP,BANF2,BFSP1,C20orf26,C20orf78,CD93,CRNKL1,CSRP2BP,CST1,CST11,CST2,CST3,CST4,CST5,CST7,CST8,CST9,CST9L,CSTL1,DSTN,DTD1,DZANK1,ENTPD6,FAM182B,FOXA2,GGTLC1,GINS1,GZF1,INSM1,KIF16B,MGME1,NAA20,NANP,NAPB,NINL,NKX2-2,NKX2-4,NXT1,OTOR,OVOL2,PAX1,PCSK2,PET117,POLR3F,PYGB,RALGAPA2,RBBP9,RIN2,RRBP1,SCP2D1,SEC23B,SLC24A3,SNRPB2,SNX5,SSTR4,SYNDIG1,THBD,VSX1,XRN2,ZNF133,ZNF337 chr20:16036126-26197899 CRNKL1,FOXA2 20p12.1 cnaBRCA31 gain 9.284001 20 51258736 53182868 6 0 0 0 BCAS1,CYP24A1,DOK5,PFDN4,TSHZ2,ZNF217 chr20:51258736-53182868 20q13.2 cnaBRCA32 loss 4.597353 13 19450806 26513279 39 0 0 0 AMER2,ATP12A,ATP8A2,C1QTNF9,C1QTNF9B,CENPJ,CRYL1,FGF9,GJA3,GJB2,GJB6,IFT88,IL17D,LATS2,MICU2,MIPEP,MPHOSPH8,MRP63,MTMR6,N6AMT2,NUPL1,PABPC3,PARP4,PSPC1,RNF17,RP11-307N16.6,RP11-408E5.4,SACS,SAP18,SGCG,SKA3,SPATA13,TNFRSF19,TPTE2,TUBA3C,XPO4,ZDHHC20,ZMYM2,ZMYM5 chr13:19450806-26513279 PABPC3,SACS,ZMYM2 13q11 cnaBRCA33 loss 2.004345 13 49060280 49082415 1 0 0 1 RCBTB2 chr13:49060280-49082415 13q14.2 cnaBRCA34 loss 4.76106 4 25832290 25842449 1 FRA4D 1 0 1 SEL1L3 chr4:25832290-25842449 4p15.2 cnaBRCA35 loss 5.326794 4 38138759 38142355 1 0 0 1 TBC1D1 chr4:38138759-38142355 4p14 cnaBRCA36 loss 4.139237 4 175301616 188763651 50 0 0 0 ACSL1,ADAM29,AGA,ANKRD37,ASB5,C4orf47,CASP3,CCDC110,CDKN2AIP,CENPU,CLDN22,CLDN24,CYP4V2,DCTD,ENPP6,F11,FAM149A,FAT1,GLRA3,GPM6A,HELT,HPGD,ING2,IRF2,KIAA1430,KLKB1,LINC01098,LRP2BP,MTNR1A,NEIL3,PDLIM3,PRIMPOL,RP11-215A19.2,RP11-279O9.4,RP11-487E13.1,RP11-701P16.2,RWDD4,SLC25A4,SNX25,SORBS2,SPATA4,SPCS3,STOX2,TENM3,TLR3,TRAPPC11,UFSP2,VEGFC,WDR17,WWC2 chr4:175301616-188763651 FAT1,IRF2 4q34.1 cnaBRCA37 gain 4.093527 15 88614625 101884307 BLM,IDH2 76 0 0 0 ABHD2,ACAN,ADAMTS17,AEN,ALDH1A3,ANPEP,AP3S2,ARRDC4,ASB7,BLM,C15orf32,C15orf38,C15orf38-AP3S2,CERS3,CHD2,CHSY1,CIB1,CRTC3,CTD-2054N24.2,DET1,FAM169B,FAM174B,FANCI,FES,FURIN,GDPGP1,HAPLN3,HDDC3,IDH2,IGF1R,IQGAP1,ISG20,KIF7,LINC00923,LINS,LRRC28,LRRK1,LYSMD4,MAN2A2,MCTP2,MEF2A,MESP1,MESP2,MFGE8,MRPL46,MRPS11,NGRN,NR2F2,NTRK3,PCSK6,PEX11A,PGPEP1L,PLIN1,POLG,PRC1,RCCD1,RGMA,RHCG,RLBP1,RP11-697E2.6,SEMA4B,SLCO3A1,SNRPA1,SPATA8,ST8SIA2,SV2B,SYNM,TICRR,TTC23,TTLL13,UNC45A,VIMP,VPS33B,WDR93,ZNF710,ZNF774 chr15:88614625-101884307 BLM,CRTC3,FANCI,IDH2,NR2F2,PCSK6 15q25.3 cnaBRCA38 loss 30.970704 15 27571787 27573178 1 0 0 1 GABRG3 chr15:27571787-27573178 15q12 cnaBRCA39 gain 1.511857 14 30448088 38635454 FOXA1,NKX2-1 42 0 0 0 AKAP6,AP4S1,ARHGAP5,BAZ1A,BRMS1L,CFL2,COCH,DTD2,EAPP,EGLN3,FAM177A1,FOXA1,G2E3,HEATR5A,HECTD1,INSM2,KIAA0391,KIAA0391,MBIP,MIPOL1,NFKBIA,NKX2-1,NKX2-8,NPAS3,NUBPL,PAX9,PPP2R3C,PRKD1,PSMA6,RALGAPA1,RP11-176H8.1,RP11-187E13.1,RP11-187E13.2,SCFD1,SFTA3,SLC25A21,SLC25A21-AS1,SNX6,SPTSSA,SRP54,STRN3,TTC6 chr14:30448088-38635454 FOXA1,NKX2-1,PSMA6 14q12 cnaBRCA40 gain 2.035989 14 50297865 50542626 3 0 0 1 ARF6,C14orf182,NEMF chr14:50297865-50542626 14q21.3 cnaBRCA41 loss 7.872943 14 100157281 100161379 1 0 0 1 CYP46A1 chr14:100157281-100161379 14q32.2 cnaBRCA42 loss 12.276206 22 36559249 36585255 2 0 0 1 APOL3,APOL4 chr22:36559249-36585255 22q12.3 cnaBRCA43 loss 1.766231 22 45575017 45579347 1 FRA22A 0 1 1 NUP50 chr22:45575017-45579347 22q13.31 cnaBRCA44 loss 34.138889 9 37033260 37034925 PAX5 1 0 0 1 PAX5 chr9:37033260-37034925 PAX5 9p13.2 cnaBRCA45 loss 1.368568 9 136079456 136085872 1 0 0 1 OBP2B chr9:136079456-136085872 9q34.2 cnaBRCA46 loss 9.228819 9 137641680 137643018 1 0 0 1 COL5A1 chr9:137641680-137643018 9q34.3 cnaBRCA47 gain 4.048636 7 53722520 56951522 EGFR 16 0 0 1 CCT6A,CHCHD2,EGFR,GBAS,LANCL2,MRPS17,MRPS17,NUPR1L,PHKG1,PSPH,SEC61G,SEPT14,SUMF2,VOPP1,VSTM2A,ZNF713 chr7:53722520-56951522 EGFR 7p12.1 cnaBRCA48 gain 3.483349 7 154070324 158385118 24 FRA7I 1 0 0 AC005481.5,AC008060.7,AC009403.2,AC021218.2,AC099552.4,BLACE,C7orf13,CNPY1,DNAJB6,DPP6,EN2,HTR5A,HTR5A-AS1,INSIG1,LMBR1,MNX1,NOM1,PAXIP1,PAXIP1-AS2,PTPRN2,RBM33,RNF32,SHH,UBE3C chr7:154070324-158385118 7q36.2 cnaBRCA49 loss 70.14251 7 42266969 42268947 1 0 0 1 GLI3 chr7:42266969-42268947 7p14.1 cnaBRCA50 loss 5.423702 7 105889584 105895267 1 FRA7F 1 0 1 NAMPT chr7:105889584-105895267 7q22.3 cnaBRCA51 loss 7.682723 7 117829640 117833234 1 0 0 1 NAA38 chr7:117829640-117833234 7q31.31 cnaBRCA52 loss 4.342437 16 48326310 48337281 1 0 0 1 LONP2 chr16:48326310-48337281 16q12.1 cnaBRCA53 loss 2.661181 16 50728564 50730989 1 0 0 1 NOD2 chr16:50728564-50730989 16q12.1 cnaBRCA54 loss 3.015963 16 56716631 56722221 1 0 0 1 MT1X chr16:56716631-56722221 16q13 cnaBRCA55 loss 2.851073 16 58143346 58147644 1 0 0 1 C16orf80 chr16:58143346-58147644 16q21 cnaBRCA56 loss 8.693997 16 83979814 83989893 2 0 0 1 OSGIN1,RP11-505K9.4 chr16:83979814-83989893 16q23.3 cnaBRCA57 loss 5.917227 18 72241321 72245041 1 0 0 1 CNDP1 chr18:72241321-72245041 18q22.3 cnaBRCA58 gain 1.89254 11 69279657 69539307 3 FRA11A 0 1 1 CCND1,FGF19,ORAOV1 chr11:69279657-69539307 CCND1 11q13.3 cnaBRCA59 loss 5.678334 11 95544850 95546242 1 0 0 1 CEP57 chr11:95544850-95546242 11q21 cnaBRCA60 loss 2.668123 11 124947152 124956036 1 0 0 1 SLC37A2 chr11:124947152-124956036 11q24.2 cnaBRCA61 gain 1.359987 1 120087678 120527361 NOTCH2 6 0 0 0 ADAM30,HMGCS2,NOTCH2,PHGDH,REG4,ZNF697 chr1:120087678-120527361 NOTCH2 1p12 cnaBRCA62 gain 1.640166 1 150511512 150690562 6 FRA1F 1 0 1 ADAMTSL4,ADAMTSL4-AS1,ENSA,GOLPH3L,HORMAD1,MCL1 chr1:150511512-150690562 1q21.3 cnaBRCA63 gain 5.138495 1 154891303 155152205 20 0 0 1 ADAM15,CKS1B,DCST1,DCST2,DPM3,EFNA1,EFNA3,EFNA3,EFNA4,FLAD1,KRTCAP2,LENEP,PBXIP1,PMVK,PYGO2,RP11-201K10.3,SHC1,SLC50A1,TRIM46,ZBTB7B chr1:154891303-155152205 1q21.3 cnaBRCA64 gain 9.352092 1 160529237 162427332 SDHC 47 0 0 1 ADAMTS4,APOA2,ARHGAP30,ATF6,B4GALT3,C1orf111,C1orf192,C1orf226,CD244,CD48,CD84,DEDD,DUSP12,F11R,FCER1G,FCGR2A,FCGR2B,FCGR3A,FCGR3B,FCRLA,FCRLB,HSPA6,ITLN1,ITLN2,KLHDC9,LY9,MPZ,NDUFS2,NIT1,NOS1AP,NR1I3,OLFML2B,PCP4L1,PFDN2,PPOX,PVRL4,RP11-544M22.13,RP11-565P22.6,SDHC,SH2D1B,SLAMF1,SLAMF7,TOMM40L,TSTD1,UFC1,USF1,USP21 chr1:160529237-162427332 SDHC 1q23.3 cnaBRCA65 loss 3.687971 1 85594452 85596111 1 FRA1D 1 0 1 WDR63 chr1:85594452-85596111 1p22.3